Multiple Taxon Collector class

Fetch, transform and build the predicted LHT dataframe for multiple species obtained from FishLife

Value

dataframe that keeps the LHT values per taxon

subset matrix of LHT values

Super class

LHTpicker::MixinUtilities -> PredictedLHTPicker

Methods

Public methods

• PredictedLHTPicker$new()

• PredictedLHTPicker$pick_and_backtransform()

• PredictedLHTPicker$clone()

Inherited methods

• LHTpicker::MixinUtilities$apply_func_to_df()
• LHTpicker::MixinUtilities$create_empty_dataframe()
• LHTpicker::MixinUtilities$list_of_vectors_to_dataframe()

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Method new()

Initialise the PredictedLHTPicker

Usage

PredictedLHTPicker$new(
  master_db,
  lht_names,
  backtransform_function_list,
  wanted_lht_df
)

Arguments

master_db

Fishlife database

lht_names

list of user-defined LHT names associated with their FishLife's counterparts

backtransform_function_list

list of backward-transformation functions to be applied on obtained LHT from FishLife

wanted_lht_df

dataframe holding the wanted taxa details as rows and LHT as columns

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Method pick_and_backtransform()

Pick and backtransform all LHT values per taxon that have beed obtained from Fishlife

Usage

PredictedLHTPicker$pick_and_backtransform()

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Method clone()

The objects of this class are cloneable with this method.

Usage

PredictedLHTPicker$clone(deep = FALSE)

Arguments

deep

Whether to make a deep clone.