Multiple Taxon Update Extractor class

Class that extracts and transform predicted values of LHTs for multiple species obtained from FishLife

Value

dataframe that keeps the original and updated LHT values per taxon

updated dataframe of results with both the original and updated LHT values

Super class

LHTpicker::MixinUtilities -> TaxaUpdatedLHTBuilder

Methods

Public methods

• TaxaUpdatedLHTBuilder$new()

• TaxaUpdatedLHTBuilder$extract_and_backtransform()

• TaxaUpdatedLHTBuilder$clone()

Inherited methods

• LHTpicker::MixinUtilities$apply_func_to_df()
• LHTpicker::MixinUtilities$create_empty_dataframe()
• LHTpicker::MixinUtilities$list_of_vectors_to_dataframe()

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Method new()

Initialise the TaxaPredictionExtractor

Usage

TaxaUpdatedLHTBuilder$new(
  update_prefix,
  lht_names,
  backtransform_function_list,
  predicting_lht_df,
  updated_lht_list
)

Arguments

update_prefix

string to be added as prefix to the column names keeping the obtained new LHT values

lht_names

list of user-defined LHT names associated with their FishLife's counterparts

backtransform_function_list

list of backward-transformation functions to be applied on obtained LHT from FishLife

predicting_lht_df

dataframe keeping the original inputted LHTs per taxon

updated_lht_list

list of updated LHTs per taxon obtained from Fishlife

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Method extract_and_backtransform()

Extract and backtransform all updated LHT values per taxon that have beed obtained from Fishlife

Usage

TaxaUpdatedLHTBuilder$extract_and_backtransform()

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Method clone()

The objects of this class are cloneable with this method.

Usage

TaxaUpdatedLHTBuilder$clone(deep = FALSE)

Arguments

deep

Whether to make a deep clone.