Multiple Updated LHT Generator class

Allows the streamline-generation of updated LHTs given new data.

Value

list of LHT matrices, where each name in the list corresponds a single taxon

a unnamed list of LHT values per taxon

renamed list of lht which names conform to Fishlife's expected patterns

list of LHT values (another list) for each taxon

Methods

Public methods

• TaxaUpdatedLHTGetter$new()

• TaxaUpdatedLHTGetter$update()

• TaxaUpdatedLHTGetter$clone()

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Method new()

Initialise the Updated LHT Generator class

Usage

TaxaUpdatedLHTGetter$new(
  master_db,
  predicting_lht_df,
  transform_function_list,
  lht_names
)

Arguments

master_db

Fishlife database

predicting_lht_df

dataframe providing the taxon details and their predicting LHT values

transform_function_list

list of transforming function which names must conform to FishLife's expectations

lht_names

list of user-defined LHT names associated with their FishLife's counterparts

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Method update()

Update the given LHTs per taxon according to the new predicted value yielded by FishLfe

Usage

TaxaUpdatedLHTGetter$update()

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Method clone()

The objects of this class are cloneable with this method.

Usage

TaxaUpdatedLHTGetter$clone(deep = FALSE)

Arguments

deep

Whether to make a deep clone.